JSTRING: A Novel Java Tandem Repeats Searcher in Genomic Sequences with an Interactive Graphic Output

نویسندگان

  • Valeria De Fonzo
  • Filippo Aluffi-Pentini
  • Valerio Parisi
چکیده

The search of Tandem Repeats in a genomic sequence is of growing interest but unfortunately the existing tools have the drawback of producing cumbersome results that require a painstaking interpretation. In order to help users interpret the results at first glance, we implemented JSTRING that shows the results also in a very clear graphic format, thus allowing their immediate survey. The software is freely available at: http://bioinf.dms.med.uniroma1.it/JSTRING/.

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تاریخ انتشار 2008